BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB029H09LP1|AL429132
(913 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1748 1794 0.0
>3x_Contig1748
Length = 22566
Score = 1794 bits (905), Expect = 0.0
Identities = 911/913 (99%)
Strand = Plus / Plus
Query: 1 ggctatttttgagaaggcaatttcatatttcaaagaacataatgaagataagaaacgcca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5691 ggctatttttgagaaggcaatttcatatttcaaagaacataatgaagataagaaacgcca 5750
Query: 61 gcaagttttacaatctctcctggagtatgagaaagttcatggtaatcaagaaactttgga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5751 gcaagttttacaatctctcctggagtatgagaaagttcatggtaatcaagaaactttgga 5810
Query: 121 aaaggtcaatgctagacaaccaagtttggttagggaaaaagttactatcgataacattga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5811 aaaggtcaatgctagacaaccaagtttggttagggaaaaagttactatcgataacattga 5870
Query: 181 gcaagagtcatataaattggattttccggacgatcgtgttgctcaacctcctattgctcg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5871 gcaagagtcatataaattggattttccggacgatcgtgttgctcaacctcctattgctcg 5930
Query: 241 aaatcttctagctttggcaaaacaatgggagaaaaattccagctgatatgtaactttata 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5931 aaatcttctagctttggcaaaacaatgggagaaaaattccagctgatatgtaactttata 5990
Query: 301 ttcatatacagataatacaattgtagatttagaacacgcatttaatcaggttggcatata 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5991 ttcatatacagataatacaattgtagatttagaacacgcatttaatcaggttggcatata 6050
Query: 361 ggctattgagaaaaaatacgaattgtattaattattcgtttcattatcggtaaaactttg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6051 ggctattgagaaaaaatacgaattgtattaattattcgtttcattatcggtaaaactttg 6110
Query: 421 tggcaactggtttgacggtatcgaactgggtgttgatatcgtagaaggggtaagcccagg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6111 tggcaactggtttgacggtatcgaactgggtgttgatatcgtagaaggggtaagcccagg 6170
Query: 481 tgcattcattgtcggtacagatcctgggggcattaatcctggaggaacgttgcctggtgc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6171 tgcattcattgtcggtacagatcctgggggcattaatcctggaggaacgttgcctggtgc 6230
Query: 541 tgccaatcctggtgctgccaatcctggtgctgccaatcctggtgctgccaatcctggtgc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6231 tgccaatcctggtgctgccaatcctggtgctgccaatcctggtgctgccaatcctggtgc 6290
Query: 601 tgccaatcctggtgctgccaatcctggtgctgccaatcctggtgctgccattcctggtgc 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6291 tgccaatcctggtgctgccaatcctggtgctgccaatcctggtgctgccattcctggtgc 6350
Query: 661 tgccattcctggtgctgccattccgggaggagataaacctgggggtgccattcctggagt 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6351 tgccattcctggtgctgccattccgggaggagataaacctgggggtgccattcctggagt 6410
Query: 721 agcaatatttaagtttccttcagtgatacctattccagacgttgaattttctgcagccag 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6411 agcaatatttaagtttccttcagtgatacctattccagacgttgaattttctgcagccag 6470
Query: 781 agattcggatctggctgaaacagaagaaggtgaacctacagaagagttggagcccgctgt 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6471 agattcggatctggctgaaacagaagaaggtgaacctacagaagagttggagcccgctgt 6530
Query: 841 agcagttatcccatcacctcctagtccatcaatagaaatttgcatcataggggttagtct 900
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6531 agcagtaatcccatcacctcctagtccatcaatagaaatttgcatcataggggttagtct 6590
Query: 901 atgagtttttacg 913
|||||| ||||||
Sbjct: 6591 atgagtatttacg 6603
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6203
Number of Sequences: 1807
Number of extensions: 6203
Number of successful extensions: 49
Number of sequences better than 1.0e-20: 1
length of query: 913
length of database: 10,358,551
effective HSP length: 16
effective length of query: 897
effective length of database: 10,329,639
effective search space: 9265686183
effective search space used: 9265686183
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)